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Univ. of Washington researchers design and build custom machines from proteins

Design of protein rrotors made by Univ. of Washington researchers at the Institute for Protein Design. (IPD Image)

The scientists at the University of Washington’s Institute for Protein Design are on a roll lately. They won Science magazine’s “Breakthrough of the Year” award, published a way to make sleek drug-like proteins, and spinouts including Cyrus Biotechnology and A-Alpha Bio keep raising money and forging partnerships.

Now the protein designers are going big. In a study in Science Thursday, they showcase designs for custom rotors made out of proteins. These are protein machines. And though they are super tiny from a human perspective — each is a billion times smaller than a poppy seed — they are big in the protein world. And they have the potential to take on some challenging jobs.

“One of our goals is to create nanomachines that might one day circulate through the blood and autonomously remove unwanted plaques or even cancer cells,” said UW biochemist Alexis Courbet in an IPD press release, referring to plaques in the arteries that cause heart disease. “We know that very complex machines can be assembled from simple parts,” she added.

Using electron microscopy to visualize the machines, the researchers found that their protein systems could fold into the mechanism they had designed computationally.  

The body already makes some of its own machines, such as those that replicate DNA or perform other operations. But the new findings open the door to more possibilities, paving the way for the design of protein machines that could do useful work in the body or even outside of it.

Courbet, a postdoctoral researcher in the lab of IPD head David Baker, led the study along with Jesse Hansen, a recent graduate student in UW associate professor of biochemistry Justin Kohlman. Scientists in the lab of UW biochemistry professor David Veesler were also involved in visualizing the machines on the electron microscope.



from GeekWire https://www.geekwire.com/2022/univ-of-washington-researchers-design-and-build-custom-machines-from-proteins/

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